This is such an odd scenario. I would not worry that it will have much of an impact on your admission chances. You have two other LOR, and a lot of schools only accept two. Even for schools that accept more, they already have two for you, and LOR are only one of the many factors they consider. So overall I would not be that worried. But I think it’s fine for you to ask your counselor to reach out to other schools and inquire whether they received complete recommendations and, if not, offer to send a more complete one. Good luck!
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