<p>In the circumstances you describe I don’t think there will be any problem. She may need to write a little explanation in the “Is there anything else you want to share with us” part of the application, or she may want to ask her GC to explain the issue. You’ll have to ask the flagship what the effect is on the GPA, but whatever it is, I don’t think it will be a problem as long as you have a note explaining the reason for the late withdrawal from the class.</p>