<p>I’m going through a very similar dilemma.</p>
<p>If you’re interested in software then apply to L&S, the classes are virtually the same save the physics and engineering courses. Engineering at Berkeley is extremely competitive and if EE is not something you’re interested in there’s no point in applying to EECS. I’d highly suggest taking physics and all other required prerequisites if you want UCLA to be your second choice. I highly doubt UCLA will accept you with the physics series incomplete. And I wouldn’t plan my schedule around the assumption you’ll have guaranteed admission at UCB even with a high GPA, have a solid backup and a safety.</p>
<p>As for the college courses, yes they will count. The best you can do is perhaps try to retake them.</p>