I only took 3 courses Junior year?!

<p>I posted a similar post earlier.
My junior year I went to an independent study school to make up 3 Fs from freshman year. I spent a lot of time on it, working as fast as I could, and completed Junior English, US History, and a semester of Health and Latin American Geography. By that time it was June and the school year was over (summer break.) They didn’t offer AP classes, and unfortunately I could not work any faster than I was working because I was only allowed to turn in a certain amount of things per week. What do I do?! Are my chances at university completely crushed? :/</p>