First of all, how was your English when you arrived? Even if you were the child of Anglos, unless you did a lot of reading and writing in English at home with a tutor or with a parent’s guidance, your English would normally have been weak upon arrival from Israel before high school. So I think that you could somehow convey this in your application - it would explain your not having gone straight into the highest honors courses. Second - where are your safeties? You should be applying to Penn State main campus, maybe a branch too in case you need to do two years at a branch. Penn State has good engineering, although I don’t know about bioengineering. I don’t know if RPI got back to you yet, but I think you have a chance. BTW, RPI will negotiate financial aid. I think you’ll get into Temple, U Pitt, maybe SUNY Binghamton, . I don’t think that you have a chance at all the highly competitive schools you’ve applied for. Your extracurriculars don’t help (although I think they were probably a very good thing for you, because they helped with adjustment to the US). The two activities that made me want to hear more, were the math tutoring for Keystones, and the app project.
Are your parents ready and able to pay over 70K/yr for school? If you would qualify for fin aid if you had a green card, might it not make sense to somehow do a gap year, so that you’d qualify for aid, since you expect that you’ll have the green card in time for that?